Remote Accounting Manager Jobs in San Diego, CA

Remote accounting manager roles you can do from San Diego, California.

Browse remote accounting manager positions open to candidates in San Diego, California — many are fully remote roles suitable for workers based in California. Many are open across the US (some worldwide); check each listing's eligibility.

Only remote roles · Updated daily · Apply directly

951 jobs · 114 new in the last 7 days · Updated Oct 29, 2026

Company logo

Accountant Lead

Remote in San Diego, CA Full Time $90K – $150K/yr
Company logo

Financial Controller - $36.06 - $48.08 per hour

Remote in San Diego, CA Full Time $36 – $48/hr
Company logo

CAS Senior Manager

Remote in San Diego, CA Full Time $135K – $185K/yr
Company logo

Assistant Financial Controller

Remote in San Diego, CA Full Time $140K – $155K/yr
Company logo

Manager, Tax

Remote in San Diego, CA Full Time $125.6K – $188.4K/yr
Company logo

Accounting Lead

Remote in San Diego, CA Full Time $101K – $165K/yr
Company logo

Accounting Lead

Remote in San Diego, CA Full Time $101K – $165K/yr
Company logo

Accounting Lead

Remote in San Diego, CA Full Time $101K – $165K/yr
Company logo

Accounting Lead

Remote in San Diego, CA Full Time $101K – $165K/yr
Company logo

Accounting Lead

Remote in San Diego, CA Full Time $101K – $165K/yr
Company logo

Accounting Lead

Remote in San Diego, CA Full Time $101K – $165K/yr
Company logo

Accounting Lead

Remote in San Diego, CA Full Time $101K – $165K/yr
Company logo

Staff Accountant

Remote in San Diego, CA Full Time $68K – $72K/yr
Company logo

Finance Controller / Accountant–Government Contracting (GovCon)

Remote in San Diego, CA Full Time $90K – $100K/yr
Company logo

Manager Financial Reporting & Analysis

Remote in San Diego, CA Full Time $125K – $140K/yr
Company logo

Medicaid/Medicare Staff Accountant 3

Remote in San Diego, CA Full Time $92K – $102K/yr
Company logo

Senior Forward Deployed Accountant

Remote in San Diego, CA Full Time $132K – $198K/yr
Company logo

Fractional Controller - Financial and Accounting Professional

Remote in San Diego, CA Full Time Est. $90K – $125K/yr
Company logo

Accounting Manager – Remote (U.S. Based)

Remote in San Diego, CA Full Time $80K – $110K/yr
Company logo

Accountant - Remote

Remote in San Diego, CA Full Time Est. $90K – $120K/yr