Find Remote Accounting Jobs

Remote Nonprofit Accounting Jobs in San Diego, CA

Remote nonprofit accounting roles you can do from San Diego, California.

Browse remote nonprofit accounting positions open to candidates in San Diego, California — many are fully remote roles suitable for workers based in California. Many are open across the US (some worldwide); check each listing's eligibility.

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621 jobs · 80 new in the last 7 days · Updated Oct 29, 2026

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Grant Accountant

Remote in San Diego, CA Full Time $67K – $77K/yr
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Temporary Part-Time Accountant (Remote - Must Live in Washington State)

Remote in San Diego, CA Temporary $38 – $48/hr
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Accountant

Remote in San Diego, CA Est. $18K – $30K/yr
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Senior Tax Accountant-Exempt Organizations

Remote in San Diego, CA Full Time Est. $75K – $105K/yr
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Volunteer: Accounting Systems Set Up

Remote in San Diego, CA Contract
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Finance & Grants Analyst

Remote in San Diego, CA Full Time $75.2K – $106.2K/yr
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FIN- Contract Accountant

Remote in San Diego, CA Full Time Est. $65K – $90K/yr
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PT Remote Accountant, NFP

Remote in San Diego, CA Part Time $4K – $5K/yr
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Volunteer: Independent CPA Financial Review for Women-Led Nonprofit

Remote in San Diego, CA Freelance Est. $70K – $95K/yr
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Nonprofit Accountant

Remote in San Diego, CA Contract $35 – $42/yr
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Grant Accountant

Remote in San Diego, CA Full Time $70K – $75K/yr
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Sr. Business Analyst - Sponsored Programs and Financial Services - WFH (candidates located in EST only)

Remote in San Diego, CA Full Time $31 – $48/hr
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Accountant

Remote in San Diego, CA Freelance Est. $45K – $65K/yr
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Senior Accounts Payable Specialist

Remote in San Diego, CA Full Time $80K – $95K/yr
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Accountant

Remote in San Diego, CA Freelance Est. $45K – $65K/yr
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Strategic Finance and Operations Analyst

Remote in San Diego, CA Full Time $82K – $108K/yr
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Senior Financial Analyst

Remote in San Diego, CA Full Time $91.0K – $138.3K/yr
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Manager, Accounting Advisory - Behavioral Health Industry

Remote in San Diego, CA Full Time Est. $90K – $125K/yr
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Senior Manager (Non-Profit Assurance)

Remote in San Diego, CA Full Time $161.9K – $193.7K/yr
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Manager, Accounting Advisory - Behavioral Health Industry

Remote in San Diego, CA Full Time Est. $90K – $125K/yr

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