Remote Nonprofit Accounting Jobs in San Francisco, CA

Remote nonprofit accounting roles you can do from San Francisco, California.

Browse remote nonprofit accounting positions open to candidates in San Francisco, California — many are fully remote roles suitable for workers based in California. Many are open across the US (some worldwide); check each listing's eligibility.

Only remote roles · Updated daily · Apply directly

621 jobs · 80 new in the last 7 days · Updated Oct 29, 2026

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Payroll and Operations Specialist

Remote in San Francisco, CA Full Time $70K – $85K/yr
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Onboarding Senior Accountant

Remote in San Francisco, CA Full Time $75K – $88K/yr
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Senior Accountant

Remote in San Francisco, CA Full Time $70K – $90K/yr
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Volunteer: Grant-Ready Accounting Setup

Remote in San Francisco, CA Freelance Est. $35K – $65K/yr
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Tax Senior Associate - Exempt Organizations Tax Services

Remote in San Francisco, CA Full Time $80K – $125K/yr
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Controller

Remote in San Francisco, CA Full Time $100K – $120K/yr
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Accountant

Remote in San Francisco, CA
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Finance Analyst III

Remote in San Francisco, CA Full Time $90K – $110K/yr
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Accounting Associate (Volunteer)

Remote in San Francisco, CA Part Time
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Senior Accountant

Remote in San Francisco, CA Part Time $83.6K – $90K/yr
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Senior Accountant

Remote in San Francisco, CA Full Time $75K – $80K/yr
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Non-profit Accountant

Remote in San Francisco, CA Part Time $34 – $35/hr
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Grants and Contract Financial Analyst

Remote in San Francisco, CA Full Time $53K – $77K/yr
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Staff Accountant

Remote in San Francisco, CA Full Time $68K – $74K/yr
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School Finance Analyst

Remote in San Francisco, CA Part Time $48.9K – $67.5K/yr
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Accountant

Remote in San Francisco, CA Est. $45K – $65K/yr
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Accountant

Remote in San Francisco, CA Freelance Est. $12K – $30K/yr
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Fractional Staff Accountant - Non-profit

Remote in San Francisco, CA Contract Est. $32K – $48K/yr
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Senior Accountant

Remote in San Francisco, CA Full Time Est. $70K – $90K/yr
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Finance Manager

Remote in San Francisco, CA Full Time $80K – $130K/yr