Remote Nonprofit Accounting Jobs in San Francisco, CA

Remote nonprofit accounting roles you can do from San Francisco, California.

Browse remote nonprofit accounting positions open to candidates in San Francisco, California — many are fully remote roles suitable for workers based in California. Many are open across the US (some worldwide); check each listing's eligibility.

Only remote roles · Updated daily · Apply directly

621 jobs · 80 new in the last 7 days · Updated Oct 29, 2026

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Accounts Payable and Payroll Specialist

Remote in San Francisco, CA Full Time Est. $48K – $65K/yr
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Volunteer —National Treasurer

Remote in San Francisco, CA Est. $60K – $90K/yr
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Staff Accountant

Remote in San Francisco, CA Full Time $68K – $72K/yr
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Grants Accountant

Remote in San Francisco, CA Full Time Est. $48K – $65K/yr
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Research Finance Analyst II, Research Finance

Remote in San Francisco, CA Full Time $62.5K – $91K/yr
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Analyst, Mission Finance

Remote in San Francisco, CA Full Time $68K – $73K/yr
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Analyst, Mission Finance

Remote in San Francisco, CA Full Time $68K – $73K/yr
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Analyst, Mission Finance

Remote in San Francisco, CA Full Time $68K – $73K/yr
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Analyst, Mission Finance

Remote in San Francisco, CA Full Time $68K – $73K/yr
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Analyst, Mission Finance

Remote in San Francisco, CA Full Time $68K – $73K/yr
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Analyst, Mission Finance

Remote in San Francisco, CA Full Time $68K – $73K/yr
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Analyst, Mission Finance

Remote in San Francisco, CA Full Time $68K – $73K/yr
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Analyst, Mission Finance

Remote in San Francisco, CA Full Time $68K – $73K/yr
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Staff Accountant

Remote in San Francisco, CA Full Time $75K – $85K/yr
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Accountant

Remote in San Francisco, CA Full Time Est. $75K – $105K/yr
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REMOTE Audit Manager | Up to $175K salary

Remote in San Francisco, CA Full Time $130K – $175K/yr
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Sponsored Projects Accountant

Remote in San Francisco, CA Full Time Est. $55K – $75K/yr
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Accountant

Remote in San Francisco, CA Freelance Est. $45K – $65K/yr
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Accountant

Remote in San Francisco, CA Full Time Est. $65K – $90K/yr
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Volunteer: Two-Year Independent Financial Audit (CPA Required)

Remote in San Francisco, CA Temporary Est. $70K – $110K/yr