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Remote Nonprofit Accounting Jobs in San Francisco, CA

Remote nonprofit accounting roles you can do from San Francisco, California.

Browse remote nonprofit accounting positions open to candidates in San Francisco, California — many are fully remote roles suitable for workers based in California. Many are open across the US (some worldwide); check each listing's eligibility.

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621 jobs · 80 new in the last 7 days · Updated Oct 29, 2026

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Fractional Financial Controller (contractor)

Remote in San Francisco, CA Full Time $40K – $50K/yr
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Financial Analyst & Compliance Associate (Remote | National Impact)

Remote in San Francisco, CA Part Time Est. $25K – $35K/yr
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Executive Leadership: Finance Director / CFO-Track (Remote | National Impact)

Remote in San Francisco, CA Freelance Est. $70K – $100K/yr
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Accountant

Remote in San Francisco, CA Full Time $64K – $72K/yr
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Treasurer

Remote in San Francisco, CA Part Time
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Fiscal Analyst

Remote in San Francisco, CA Full Time $90K – $115K/yr
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Volunteer: Financial Management Review & Grant Readiness Assessment

Remote in San Francisco, CA Freelance Est. $50K – $70K/yr
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Senior Financial Modeling Analyst

Remote in San Francisco, CA Full Time $105K – $120K/yr
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Senior Accountant

Remote in San Francisco, CA Full Time Est. $70K – $95K/yr
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Senior Accountant

Remote in San Francisco, CA Full Time Est. $70K – $95K/yr
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Remote NFP Audit Manager | Single Audit | Independent CPA Firm | Up to $125k + Bonus

Remote in San Francisco, CA Full Time $125K/yr
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Senior Accountant

Remote in San Francisco, CA Full Time Est. $70K – $95K/yr
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Accounting & Finance Operations Specialist

Remote in San Francisco, CA Full Time $80K – $85K/yr
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Senior Accountant - Grants, Contracts & Projects

Remote in San Francisco, CA Full Time $75K – $90K/yr
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US Bookkeeper (QuickBooks) — Part-Time

Remote in San Francisco, CA Part Time Est. $35K – $48K/yr
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Onboarding Senior Accountant

Remote in San Francisco, CA Full Time $75K – $88K/yr
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Accountant

Remote in San Francisco, CA Full Time $47.9K – $85.4K/yr
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Grant Accountant

Remote in San Francisco, CA Full Time $25 – $27/hr
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Financial Analyst

Remote in San Francisco, CA Full Time Est. $65K – $90K/yr
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Payroll and Accounts Payable Coordinator

Remote in San Francisco, CA Full Time $53K – $67K/yr

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