Remote Nonprofit Accounting Jobs in Houston, TX

Remote nonprofit accounting roles you can do from Houston, Texas.

Browse remote nonprofit accounting positions open to candidates in Houston, Texas — many are fully remote roles suitable for workers based in Texas. Many are open across the US (some worldwide); check each listing's eligibility.

Only remote roles · Updated daily · Apply directly

627 jobs · 72 new in the last 7 days · Updated Oct 30, 2026

Bookkeeper

Remote in Houston, TX Full Time Est. $45K – $65K/yr

Nonprofit Accountant – QuickBooks Cleanup & Financial Reporting

Remote in Houston, TX Contract $300/mo

Controller

Remote in Houston, TX Full Time Est. $110K – $145K/yr

Bookkeeper

Remote in Houston, TX Full Time $52.2K/yr

Grants & Contracts Administrator - Post-Award Accountant, Office of Sponsored Programs (Remote Eligible)

Remote in Houston, TX Full Time Est. $65K – $85K/yr

Not-for-Profit Client Accounting - Manager

Remote in Houston, TX Full Time $120K – $180K/yr

Director of Accounting

Remote in Houston, TX Full Time $142.5K – $156.8K/yr

Not-for-Profit Client Accounting - Senior Manager

Remote in Houston, TX Full Time $150K – $250K/yr

Senior Accountant

Remote in Houston, TX Full Time $80K – $84.5K/yr

Accounts Receivable Specialist

Remote in Houston, TX Full Time Est. $52K – $70K/yr

Bookkeeper

Remote in Houston, TX Full Time Est. $30K – $42K/yr

Staff Accountant

Remote in Houston, TX Full Time $50.4K/yr

Staff Accountant

Remote in Houston, TX Full Time $28 – $33/hr

Accounts Receivable Specialist

Remote in Houston, TX Full Time Est. $52K – $68K/yr

Associate Manager, Technical Reviews & Training - CPA

Remote in Houston, TX Full Time $103K – $110K/yr

Volunteer: Nonprofit Bookkeeping & Reporting Setup

Remote in Houston, TX Contract Est. $30K – $45K/yr

Finance Systems & Process Lead

Remote in Houston, TX Full Time $104K – $130K/yr

Associate Manager, Technical Accounting – CPA

Remote in Houston, TX Full Time $103K – $110K/yr

Accounts Receivable Specialist

Remote in Houston, TX Full Time Est. $52K – $70K/yr

Tribal Services Accounting Manager

Remote in Houston, TX Full Time $66K – $182.2K/yr

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