Remote Nonprofit Accounting Jobs in Houston, TX

Remote nonprofit accounting roles you can do from Houston, Texas.

Browse remote nonprofit accounting positions open to candidates in Houston, Texas — many are fully remote roles suitable for workers based in Texas. Many are open across the US (some worldwide); check each listing's eligibility.

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626 jobs · 72 new in the last 7 days · Updated Oct 30, 2026

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Unanet ERP Manager, Industry Specialty Services

Remote in Houston, TX Full Time $125K – $165K/yr
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Michigan Director of Finance

Remote in Houston, TX Full Time $100K – $105K/yr
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Controller/VP of Finance

Remote in Houston, TX Full Time Est. $105K – $150K/yr
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Sr. Financial Reporting Analyst - remote

Remote in Houston, TX Full Time $78.5K – $125.7K/yr
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Tax Director

Remote in Houston, TX Full Time $100K – $375K/yr
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Senior Accountant - CPA Preferred

Remote in Houston, TX Full Time Est. $85K – $110K/yr
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Senior Finance Operations Manager

Remote in Houston, TX Full Time Est. $85K – $115K/yr
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Director Accounting Operations

Remote in Houston, TX Full Time Est. $145K – $190K/yr
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AP Specialist

Remote in Houston, TX Full Time $55K – $65K/yr
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Accounting Associate

Remote in Houston, TX Full Time $40K – $47K/yr
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Senior Accountant - CPA Preferred

Remote in Houston, TX Full Time Est. $85K – $105K/yr
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Finance Associate

Remote in Houston, TX Full Time $25 – $38/hr
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Bookkeeper

Remote in Houston, TX Full Time $45K – $52K/yr
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Accounting Administrator

Remote in Houston, TX Full Time $45K – $52K/yr
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Accounting Operations Specialist

Remote in Houston, TX Full Time $65K – $68K/yr
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Senior (NFP) - Business Process Outsourcing (52661)

Remote in Houston, TX Full Time Est. $85K – $110K/yr
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Finance Specialist

Remote in Houston, TX Full Time $60K – $90K/yr
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Senior Manager, Financial Reporting

Remote in Houston, TX Full Time $108.9K – $122K/yr
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Principal - Not-for-Profit Tax

Remote in Houston, TX Full Time $250.6K – $394.4K/yr
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Bookkeeper

Remote in Houston, TX Full Time Est. $45K – $65K/yr