Remote Controller Jobs in San Diego, CA

Remote controller roles you can do from San Diego, California.

Browse remote controller positions open to candidates in San Diego, California — many are fully remote roles suitable for workers based in California. Many are open across the US (some worldwide); check each listing's eligibility.

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903 jobs · 83 new in the last 7 days · Updated Oct 29, 2026

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Assistant Controller

Remote in San Diego, CA Full Time Est. $105K – $140K/yr
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Financial Controller

Remote in San Diego, CA Full Time $90K – $120K/yr
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Financial Controller

Remote in San Diego, CA Full Time $85K – $95K/yr
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Senior Financial Controller

Remote in San Diego, CA Full Time $70K – $100K/yr
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SU - Financial Controller

Remote in San Diego, CA Full Time $7.5K – $10K/mo
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Senior Manager, Affirm Bank Accounting (Controller)

Remote in San Diego, CA Full Time $164K – $245K/yr
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Senior Manager, Affirm Bank Accounting (Controller)

Remote in San Diego, CA Full Time $185K – $245K/yr
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Senior Manager, Affirm Bank Accounting (Controller)

Remote in San Diego, CA Full Time $185K – $245K/yr
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Senior Manager, Affirm Bank Accounting (Controller)

Remote in San Diego, CA Full Time $185K – $245K/yr
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Senior Manager, Affirm Bank Accounting (Controller)

Remote in San Diego, CA Full Time $185K – $245K/yr
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Senior Manager, Affirm Bank Accounting (Controller)

Remote in San Diego, CA Full Time $164K – $245K/yr
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Corporate Controller - Remote

Remote in San Diego, CA Full Time $150K – $200K/yr
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Senior Accounting Manager / Hands-On Controller

Remote in San Diego, CA Full Time Est. $120K – $165K/yr
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Portfolio Controller - Private Equity Advisory

Remote in San Diego, CA Full Time Est. $130K – $175K/yr
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Senior Manager, Affirm Bank Accounting (Controller)

Remote in San Diego, CA Full Time $185K – $245K/yr
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Senior Manager, Affirm Bank Accounting (Controller)

Remote in San Diego, CA Full Time $185K – $245K/yr
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Not-for-Profit Client Accounting - Senior Manager

Remote in San Diego, CA Full Time $150K – $250K/yr
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Senior Manager, Affirm Bank Accounting (Controller)

Remote in San Diego, CA Full Time $185K – $245K/yr
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Senior Manager, Affirm Bank Accounting (Controller)

Remote in San Diego, CA Full Time $164K – $245K/yr
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Senior Manager, Affirm Bank Accounting (Controller)

Remote in San Diego, CA Full Time $185K – $245K/yr