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Remote Nonprofit Accounting Jobs in San Diego, CA

Remote nonprofit accounting roles you can do from San Diego, California.

Browse remote nonprofit accounting positions open to candidates in San Diego, California — many are fully remote roles suitable for workers based in California. Many are open across the US (some worldwide); check each listing's eligibility.

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621 jobs · 85 new in the last 7 days · Updated Oct 28, 2026

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Investor Relations, Lead Analyst

Remote in San Diego, CA Full Time $85K – $105K/yr
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Finance, Controller

Remote in San Diego, CA Full Time $170K – $195K/yr
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Accountant

Remote in San Diego, CA Full Time Est. $65K – $90K/yr
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Manager, Revenue Operations

Remote in San Diego, CA Full Time $120K/yr
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Senior Accountant

Remote in San Diego, CA Contract $50 – $60/hr
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Senior Accountant

Remote in San Diego, CA Contract $50 – $60/hr
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Volunteer: Establish Bookkeeping Systems

Remote in San Diego, CA Temporary Est. $35K – $50K/yr
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PART-TIME ACCOUNTANT TO SOUTHEAST ASIAN TEAM

Remote in San Diego, CA Part Time Est. $15K – $25K/yr
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Audit Manager - Remote

Remote in San Diego, CA Full Time $120K – $150K/yr
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Audit Manager - Remote

Remote in San Diego, CA Full Time $120K – $150K/yr
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Expense Reimbursement Processor

Remote in San Diego, CA Temporary Est. $35K – $48K/yr
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Accountant & Bookkeeper

Remote in San Diego, CA Freelance Est. $40K – $60K/yr
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Senior Accountant (Remote)

Remote in San Diego, CA Full Time $80K – $105K/yr
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REMOTE Nonprofit Audit Manager | Up to $180K salary

Remote in San Diego, CA Full Time $180K/yr
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Financial Analyst

Remote in San Diego, CA Full Time $65.7K – $71.5K/yr
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Sr. Financial Analyst

Remote in San Diego, CA Full Time $94.5K/yr
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Accountant

Remote in San Diego, CA Full Time Est. $60K – $80K/yr
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Financial Analyst

Remote in San Diego, CA Full Time
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Payroll and Accounts Payable Coordinator

Remote in San Diego, CA Full Time $53K – $67K/yr
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Volunteer: QuickBooks Setup and Grant Tracking Workflow for AFib Nonprofit

Remote in San Diego, CA

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